Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913958.1_cds_XP_016463975.1_57050
CDS Infomation

[gene=LOC107786974] [db_xref=GeneID:107786974] [protein=DEAD-box ATP-dependent RNA helicase 7-like] [protein_id=XP_016463975.1] [location=complement(join(77578..77762,77944..78077,78222..78316,78398..78494,78576..78744,78830..78890,78974..79075,79360..79471,79576..79730,79922..79992,80196..80307,80416..80556,80645..80779,81454..81960))] [gbkey=CDS]
Sequence

ATGCCTGCACTTGTTGTAAGTGAAACAATGGGGTCTGAAGAGTCGAAGGAGCTGAAGAAG
AAGATGAAAAAGAGCGAAAAAGGATCATCCGCCGACACCCTTAAAAAGTCGAAAAAGACC
AAGATTGATTCTGGGTCTGATTCAGAAGAGCTTAAGAAGAGTAAGAAGAAAGATAAGAAG
CGAAAAGCCTTAAACTTGGATGATGATGATGAGGATGGAAGTTCGGAGATAGTGGAGCCG
AGTAATTTGATTGGGGATGACAAGAAGAAAAAGAAGAAAAAGGCTAAATTGGTGGAGAAT
GATGATGATGAGGAGAAAGAGAAAGAGAAAGAGAAAGAGAGAGAGAAAGAGGAGGATCCT
AATGCTTTGTCTAATTTTAGGATTTCGGTGCCTTTAAGAGAGGCTTTGATTGCTAAGGGG
ATTCAAGCGCTCTTTCCTATTCAAGCTATGACTTTTGATGCTGTCTTTGATGGGAATGAC
TTAGTTGGTCGAGCTCGCACTGGTCAGGGTAAAACATTGGCCTTTGTGTTGCCCATATTG
GAGTCCCTGACAAATGGTCCTACTAAAGCATCTCGGAAAACAGGGTATGGGAGAGCTCCT
AGTGTTTTGGTGCTTTTACCTACTAGGGAATTGGCACTTCAGGTGTTTGCTGACTTTGAA
GTTTATGGTCGGGCTGTGGGGCTCACTTCATGTTGTTTGTATGGAAATTCTCCTATGGGA
CAACAACAAGTTCAGTTGAAAAGAGGAGTTGATATTGTTGTGGGTACTCCTGGAAGAGTT
AAGGACCACATTGAAAGAGGAAATATTGATTTCAGGTCTCTAAAGTTCCGTGTTCTTGAT
GAAGTTGATGAAATGCTGAAAATTGGTTTTGTTGATGATGTGGAATTTATATTAGGCAAG
GTTGAAGATGCGAGCCAAGTTCAAACACTTCTTTTCAGTGCCACTTTGCCAAGCTGGGTG
AAGCATATATCTTCTAAGTTTCTCAAACCTGATAAGAAAACAGCTGATCTTGTTGGTGAT
GAGAAAATGAAGGCCAGTAAGAATGTGAGACATATTATTATACCATGCTCTAGTTCAGCC
AGAACTCAGCTGATTCCTGATATTATTCGCTGCTACAGCAGTGGTGGCCGCACTATTATT
TTCACTGAAACAAGGGGTTATGCTTCGGAGCTAGCTGGCTTATTGCCGGGAGCACATGCT
TTGCATGGAGAGATTCAACAGTCCCAGCGTGAGGTTACACTATCTGGATTCAGATCAGGA
AAATTCCTGACATTAGTGGCCACAAATGTAGCAGCCCGTGGATTGGATATTGACGACGTT
CAATTAATTATTCAGTGTGAGCCTCCACGCGATGTCGAAGCATATATTCATCGATCTGGA
AGGACAGGACGGGCAGGAAATACTGGTGTTGCTGTAATGCTTTATGATCCTAAGAAGTCC
AACATTTCTAGGATTGAAAGAGAATCTGGTGTGAAGTTCGAGCATCTATCTGCTCCACAG
CCAGCTGATGTTGCTAAAGCGGCTGGGAAAGAAGCAGCAGAAGCAGTTGCTGAAATTTCT
GATAGTGTAATACCTGCTTTCAAGGCTGCCGCGGAGGAACTTCTACACACCTCTGAACTA
TCACCAGCAGAATTGCTTGCCAAGGCACTTGCCAAGGCAGCTGGTTACTCTGAGATCAAG
ACTCGGTCGCTTCTTTCTTCCATGGAGAACTGTGTTACTCTACTTCTTGAGTGTGGGAGG
CCCATATTTGCACCTTCATTTGCATATAATGTTTTGCGGAGGTTCCTACCTGAGGATAAG
GTTGAATCAATCAAAGGTCTTACTTTGACAGCTGATGGGAAGGGCGCGGTTTTTGATATA
TCTGCTGATGACCTGGATATGTTTCTAGCAGGGAAGAATACCCAAGGTGTAAACTTAGAG
GTAGTAAAAGAACTCCCTCGGTTGCAAGAGAAAGACCAGGCAAGAGGTGGAAGATTTGGT
GGTGGTCGTGGTGGCTTCTCTGACAGGAGAGGCGGTGGTCGCTTTTCTGGAGGCAGAGGT
GGAAGAGGTCGCGGAAACTTCGGCCGTAGATGGTGA

Peptide Sequence

PEP ID

XP_016463975.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Nicotiana tabacum]
Sequence

MPALVVSETMGSEESKELKKKMKKSEKGSSADTLKKSKKTKIDSGSDSEELKKSKKKDKK
RKALNLDDDDEDGSSEIVEPSNLIGDDKKKKKKKAKLVENDDDEEKEKEKEKEREKEEDP
NALSNFRISVPLREALIAKGIQALFPIQAMTFDAVFDGNDLVGRARTGQGKTLAFVLPIL
ESLTNGPTKASRKTGYGRAPSVLVLLPTRELALQVFADFEVYGRAVGLTSCCLYGNSPMG
QQQVQLKRGVDIVVGTPGRVKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGK
VEDASQVQTLLFSATLPSWVKHISSKFLKPDKKTADLVGDEKMKASKNVRHIIIPCSSSA
RTQLIPDIIRCYSSGGRTIIFTETRGYASELAGLLPGAHALHGEIQQSQREVTLSGFRSG
KFLTLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKS
NISRIERESGVKFEHLSAPQPADVAKAAGKEAAEAVAEISDSVIPAFKAAAEELLHTSEL
SPAELLAKALAKAAGYSEIKTRSLLSSMENCVTLLLECGRPIFAPSFAYNVLRRFLPEDK
VESIKGLTLTADGKGAVFDISADDLDMFLAGKNTQGVNLEVVKELPRLQEKDQARGGRFG
GGRGGFSDRRGGGRFSGGRGGRGRGNFGRRW

Transcript Sequence

Gene sequence data has not been registered.